CDS

Accession Number TCMCG051C31471
gbkey CDS
Protein Id XP_002316140.2
Location complement(join(17146635..17146701,17147446..17147529,17148978..17149113,17149492..17149522,17149774..17150153,17150244..17150481))
Gene LOC7481588
GeneID 7481588
Organism Populus trichocarpa

Protein

Length 311aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002316104.3
Definition uracil-DNA glycosylase, mitochondrial [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category L
Description Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K03648        [VIEW IN KEGG]
EC 3.2.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03410        [VIEW IN KEGG]
ko05340        [VIEW IN KEGG]
map03410        [VIEW IN KEGG]
map05340        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004844        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006284        [VIEW IN EMBL-EBI]
GO:0006285        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016798        [VIEW IN EMBL-EBI]
GO:0016799        [VIEW IN EMBL-EBI]
GO:0019104        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097506        [VIEW IN EMBL-EBI]
GO:0097510        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGCCTCTTCCAAAACAATAATGGATTTCCTCCAACCCGCCAAGCGCCTTAAACTCTCTTCCTCCTCTCCTTCCCCAATAGACCCCTTAAATCTCTTAAACAAATCACTCTCTGCAAAATCAACCTCCACCGACCTCACTCCTGACCAAGTATCCCGCATCGAACTCAACAAACTACGCGCCAAATCCAAACGCAACCTCAAACTGTGTTCTCAACTAGTCTCCAATTCCAAAGGTTCCTCCGGGCATGTGAATTTAGAGGAACTGTTGGTGGAGAACACGTGGCGAGAGGTGCTGCCAGGGGAGTTGGAAAAGCCGTATTTTAAGAATCTGTGTAAATTTGTGGAAAGTGAGATTAGTAACGGGAGTGTAGCTATATACCCACCGCAGCATTTGATTTTCAATGCCTTGAATTCGACACCGTTTAATACGCTCAAGGCTGTTATCATCGGACAGGATCCTTATCATGGCCCTGGTCAGGCAATGGGGCTTTCTTTTTCTGTGCCTCAAGGGGTTAAGGCACCTTCTAGTCTTGTTAATATTTTCAAGGAACTTAAGCAGGATCTGGGGTGTTCCATTCCGTCTCATGGGAATCTTGAAAAATGGGCTATTCAGGGTGTTCTATTGCTCAACACAGTTCTCACTGTTAGGAATCACCAAGCGAATTCTCATTCAAAGAAAGGATGGGAGCATTTCACTGACGCTGTTATCAAAACAATTTCACAGAAGAAGGAAGGAGTTGTTTTTCTTCTTTGGGGTAACTCAGCTCAGGAGAAATCCAAGTTAATTGACCAGACAAAGCATCACATTCTGAAGGCTGCACATCCTTCTGGCTTGTCTGCAAACAGAGGCTTCTTTGGCTGCAGGCATTTTTCTCGCACAAATAAGCTTTTGGCGCAAATGGGAATTTCCCCAATAGAATGGCAACTTTGA
Protein:  
MAASSKTIMDFLQPAKRLKLSSSSPSPIDPLNLLNKSLSAKSTSTDLTPDQVSRIELNKLRAKSKRNLKLCSQLVSNSKGSSGHVNLEELLVENTWREVLPGELEKPYFKNLCKFVESEISNGSVAIYPPQHLIFNALNSTPFNTLKAVIIGQDPYHGPGQAMGLSFSVPQGVKAPSSLVNIFKELKQDLGCSIPSHGNLEKWAIQGVLLLNTVLTVRNHQANSHSKKGWEHFTDAVIKTISQKKEGVVFLLWGNSAQEKSKLIDQTKHHILKAAHPSGLSANRGFFGCRHFSRTNKLLAQMGISPIEWQL